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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs174925 chr7:29855194 G/T 9.75E-5 489 25.03 14.32 15.9 KM Plot
THCA rs17494391 chr5:111194883 A/G 0.000165 490 12.73 16.57 15.7 KM Plot
THCA rs17525419 chr1:219514498 A/G 3.79E-7 485 15.9 16.63 7.93 KM Plot
THCA rs17526679 chr1:219554317 C/T 8.96E-5 490 15.3 19.42 13.83 KM Plot
THCA rs17572231 chr1:184029993 C/T 0 487 15.27 17.83 9.65 KM Plot
THCA rs1758643 chr10:7904849 T/C 9.46E-5 483 14.93 16.67 17.77 KM Plot
THCA rs1758645 chr10:7897121 A/G 0.000132 476 14.93 16.83 17.77 KM Plot
THCA rs1758647 chr10:7832921 C/T 3.53E-6 483 15.67 16.57 18.12 KM Plot
THCA rs1758653 chr10:7884983 A/G 3.82E-5 490 18 16.83 14.93 KM Plot
THCA rs1758654 chr10:7884560 A/G 3.81E-5 490 18 16.67 14.93 KM Plot
THCA rs1758655 chr10:7884332 T/C 3.83E-5 489 14.93 17 17.77 KM Plot
THCA rs17606064 chr7:29813705 T/A 8.85E-5 488 16.13 14.82 12.83 KM Plot
THCA rs17606361 chr10:81845411 G/C 0.000141 488 15.97 16.07 9.77 KM Plot
THCA rs1763600 chr1:16341228 C/T 1.35E-11 488 15.15 18.63 12.63 KM Plot
THCA rs1763602 chr1:16339952 C/T 1.72E-11 484 15.2 17.93 12.63 KM Plot